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论文发表总览

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2020

1. Li, Junyi, Qingzhe Xu, Mingxiao Wu, Tao Huang, and Yadong Wang. 2020. “Pan-Cancer Classification Based on Self-Normalizing Neural Networks and Feature Selection.” Frontiers in Bioengineering and Biotechnology.

2. Jiang, T., Liu, Y., Jiang, Y. et al. Long-read-based human genomic structural variation detection with cuteSV. Genome Biol 21, 189 (2020). https://doi.org/10.1186/s13059-020-02107-y

3. Li, Junyi, Yuan Ping, Hong Li, Huinian Li, Ying Liu, Bo Liu, and Yadong Wang. 2020. “Prognostic Prediction of Carcinoma by a Differential-Regulatory-Network-Embedded Deep Neural Network.” Computational Biology and Chemistry 88: 107317.

4. Juan, Liran, Yongtian Wang, Jingyi Jiang, Qi Yang, Guohua Wang, and Yadong Wang. 2020. “Evaluating Individual Genome Similarity with a Topic Model.” Bioinformatics.

5. Zhao, Tianyi, Yang Hu, Tianyi Zang, and Yadong Wang. 2020. “Identifying Protein Biomarkers in Blood for Alzheimer’s Disease.” Frontiers in Cell and Developmental Biology 8: 472.

6. Wang, Tao, Qidi Peng, Bo Liu, Yongzhuang Liu, and Yadong Wang. 2020. “Disease Module Identification Based on Representation Learning of Complex Networks Integrated From GWAS, EQTL Summaries, and Human Interactome.” Frontiers in Bioengineering and Biotechnology 8: 418.

7. Peng, Jiajie, Linjiao Zhu, Yadong Wang, and Jin Chen. 2020. “Mining Relationships among Multiple Entities in Biological Networks.” IEEE/ACM Transactions on Computational Biology and Bioinformatics 17 (3): 769–76.

8. Tan, Renjie, Jixuan Wang, Xiaoliang Wu, Liran Juan, Tianjiao Zhang, Rui Ma, Qing Zhan, Tao Wang, Shuilin Jin, and Qinghua Jiang. 2020. “ERDS-Exome: A Hybrid Approach for Copy Number Variant Detection from Whole-Exome Sequencing Data.” IEEE/ACM Transactions on Computational Biology and Bioinformatics 17 (3): 796–803.

9. Zhan, Qing, Yilei Fu, Qinghua Jiang, Bo Liu, Jiajie Peng, and Yadong Wang. 2020. “SpliVert: A Protein Multiple Sequence Alignment Refinement Method Based on Splitting-Splicing Vertically.” Protein and Peptide Letters 27 (4): 295–302.

10. Wang, Shiming, Jie Li, and Yadong Wang. 2020. “WMMDCA: Prediction of Drug Responses by Weight-Based Modular Mapping in Cancer Cell Lines.” IEEE/ACM Transactions on Computational Biology and Bioinformatics, 1–1.

11. Chu, Yanshuo, Chenxi Nie, and Yadong Wang. 2020. “A Pipeline for Reconstructing Somatic Copy Number Alternation’s Subclonal Population-Based Next-Generation Sequencing Data.” Frontiers in Genetics 10: 1374.

12. Wang, Tao, Jiajie Peng, Qidi Peng, Yadong Wang, and Jin Chen. 2020. “FSM: Fast and Scalable Network Motif Discovery for Exploring Higher-Order Network Organizations.” Methods 173: 83–93.

13. Juan, Liran, Yongtian Wang, Jingyi Jiang, Qi Yang, Qinghua Jiang, and Yadong Wang. 2020. “PGsim: A Comprehensive and Highly Customizable Personal Genome Simulator.” Frontiers in Bioengineering and Biotechnology 8: 28.

14. Dengfeng Guan, Shane A McCarthy, Jonathan Wood, Kerstin Howe, Yadong Wang, Richard Durbin, Identifying and removing haplotypic duplication in primary genome assemblies, Bioinformatics, Volume 36, Issue 9, 1 May 2020, Pages 2896–2898, https://doi.org/10.1093/bioinformatics/btaa025

15. Li, Jie, Shiming Wang, Zhuo Chen, and Yadong Wang. 2020. “A Bipartite Network Module-Based Project to Predict Pathogen-Host Association.” Frontiers in Genetics 10: 1357.

16. Li, Jie, Zhuo Chen, and Yadong Wang. 2020. “Contents, Construction Methods, Data Resources, and Functions Comparative Analysis of Bacteria Databases.” International Journal of Biological Sciences 16 (5): 838–48.

17. Wang, Tao, Qidi Peng, Bo Liu, Xiaoli Liu, Yongzhuang Liu, Jiajie Peng, and Yadong Wang. 2020. “EQTLMAPT: Fast and Accurate EQTL Mediation Analysis With Efficient Permutation Testing Approaches.” Frontiers in Genetics 10: 1309.